WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R01H10.5.1 Sequence Name  R01H10.5.1
Length (nt)  676   Chromosome Location  III: 10257173-10258741
Chromosome . Primary Identifier  III Chromosome Location . Start  10257173
Chromosome Location . End  10258741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01H10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010973 rip-1 R01H10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R01H10.5 R01H10.5 630   III: 10257214-10257311

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R01H10.5.1 10257173 10258741 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102865   139   III: 10257173-10257311 Caenorhabditis elegans
Exon102866   115   III: 10257813-10257927 Caenorhabditis elegans
Exon102867   274   III: 10257978-10258251 Caenorhabditis elegans
Exon102868   148   III: 10258594-10258741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R01H10.5.1 10257173 10258741 -1

1 Sequence

Length
676

1 Sequence Ontology Term

Identifier Name Description
transcript