WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R01H10.6.1 Sequence Name  R01H10.6.1
Length (nt)  1251   Chromosome Location  III: 10258831-10261782
Chromosome . Primary Identifier  III Chromosome Location . Start  10258831
Chromosome Location . End  10261782 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01H10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010974 bbs-5 R01H10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R01H10.6 R01H10.6 1086   III: 10258872-10259108

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R01H10.6.1 10258831 10261782 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102869   278   III: 10258831-10259108 Caenorhabditis elegans
Exon102870   585   III: 10259494-10260078 Caenorhabditis elegans
Exon102871   116   III: 10260190-10260305 Caenorhabditis elegans
Exon102872   83   III: 10261462-10261544 Caenorhabditis elegans
Exon102873   189   III: 10261594-10261782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R01H10.6.1 10258831 10261782 -1

1 Sequence

Length
1251

1 Sequence Ontology Term

Identifier Name Description
transcript