WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C4.10.1 Sequence Name  T07C4.10.1
Length (nt)  3230   Chromosome Location  III: 10321019-10325675
Chromosome . Primary Identifier  III Chromosome Location . Start  10321019
Chromosome Location . End  10325675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011562 sas-7 T07C4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.10 T07C4.10 3042   III: 10321059-10321121

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.10.1 10321019 10325675 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102978   103   III: 10321019-10321121 Caenorhabditis elegans
Exon102979   172   III: 10321185-10321356 Caenorhabditis elegans
Exon102980   323   III: 10321408-10321730 Caenorhabditis elegans
Exon102981   141   III: 10321805-10321945 Caenorhabditis elegans
Exon102982   771   III: 10322266-10323036 Caenorhabditis elegans
Exon102983   1038   III: 10323382-10324419 Caenorhabditis elegans
Exon102984   140   III: 10324519-10324658 Caenorhabditis elegans
Exon102985   307   III: 10325047-10325353 Caenorhabditis elegans
Exon102986   235   III: 10325441-10325675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.10.1 10321019 10325675 1

1 Sequence

Length
3230

1 Sequence Ontology Term

Identifier Name Description
transcript