WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C4.11a.1 Sequence Name  T07C4.11a.1
Length (nt)  1104   Chromosome Location  III: 10332526-10334018
Chromosome . Primary Identifier  III Chromosome Location . Start  10332526
Chromosome Location . End  10334018 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011563 jmjd-4 T07C4.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.11a T07C4.11a 1104   III: 10332526-10332658

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.11a.1 10332526 10334018 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103002   133   III: 10332526-10332658 Caenorhabditis elegans
Exon103004   278   III: 10332851-10333128 Caenorhabditis elegans
Exon103006   250   III: 10333179-10333428 Caenorhabditis elegans
Exon103008   138   III: 10333478-10333615 Caenorhabditis elegans
Exon103011   121   III: 10333668-10333788 Caenorhabditis elegans
Exon103012   184   III: 10333835-10334018 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.11a.1 10332526 10334018 -1

1 Sequence

Length
1104

1 Sequence Ontology Term

Identifier Name Description
transcript