WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C4.3c.1 Sequence Name  T07C4.3c.1
Length (nt)  2387   Chromosome Location  III: 10352155-10355117
Chromosome . Primary Identifier  III Chromosome Location . Start  10352155
Chromosome Location . End  10355117 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011560 T07C4.3 T07C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.3c T07C4.3c 1956   III: 10352222-10352238

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.3c.1 10352155 10355117 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103039   84   III: 10352155-10352238 Caenorhabditis elegans
Exon103044   112   III: 10352434-10352545 Caenorhabditis elegans
Exon103047   158   III: 10352602-10352759 Caenorhabditis elegans
Exon103050   149   III: 10352803-10352951 Caenorhabditis elegans
Exon103053   203   III: 10353002-10353204 Caenorhabditis elegans
Exon103056   290   III: 10353249-10353538 Caenorhabditis elegans
Exon103059   490   III: 10353586-10354075 Caenorhabditis elegans
Exon103062   138   III: 10354128-10354265 Caenorhabditis elegans
Exon103063   339   III: 10354307-10354645 Caenorhabditis elegans
Exon103068   424   III: 10354694-10355117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.3c.1 10352155 10355117 1

1 Sequence

Length
2387

1 Sequence Ontology Term

Identifier Name Description
transcript