WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C4.3a.1 Sequence Name  T07C4.3a.1
Length (nt)  2378   Chromosome Location  III: 10352157-10355116
Chromosome . Primary Identifier  III Chromosome Location . Start  10352157
Chromosome Location . End  10355116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011560 T07C4.3 T07C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.3a T07C4.3a 1950   III: 10352222-10352238

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.3a.1 10352157 10355116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103040   82   III: 10352157-10352238 Caenorhabditis elegans
Exon103043   112   III: 10352434-10352545 Caenorhabditis elegans
Exon103045   158   III: 10352602-10352759 Caenorhabditis elegans
Exon103048   149   III: 10352803-10352951 Caenorhabditis elegans
Exon103051   203   III: 10353002-10353204 Caenorhabditis elegans
Exon103054   290   III: 10353249-10353538 Caenorhabditis elegans
Exon103057   490   III: 10353586-10354075 Caenorhabditis elegans
Exon103060   138   III: 10354128-10354265 Caenorhabditis elegans
Exon103064   333   III: 10354313-10354645 Caenorhabditis elegans
Exon103067   423   III: 10354694-10355116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.3a.1 10352157 10355116 1

1 Sequence

Length
2378

1 Sequence Ontology Term

Identifier Name Description
transcript