WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C4.3b.1 Sequence Name  T07C4.3b.1
Length (nt)  1947   Chromosome Location  III: 10352222-10354753
Chromosome . Primary Identifier  III Chromosome Location . Start  10352222
Chromosome Location . End  10354753 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011560 T07C4.3 T07C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.3b T07C4.3b 1947   III: 10352222-10352238

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.3b.1 10352222 10354753 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103041   17   III: 10352222-10352238 Caenorhabditis elegans
Exon103042   109   III: 10352434-10352542 Caenorhabditis elegans
Exon103046   158   III: 10352602-10352759 Caenorhabditis elegans
Exon103049   149   III: 10352803-10352951 Caenorhabditis elegans
Exon103052   203   III: 10353002-10353204 Caenorhabditis elegans
Exon103055   290   III: 10353249-10353538 Caenorhabditis elegans
Exon103058   490   III: 10353586-10354075 Caenorhabditis elegans
Exon103061   138   III: 10354128-10354265 Caenorhabditis elegans
Exon103065   333   III: 10354313-10354645 Caenorhabditis elegans
Exon103066   60   III: 10354694-10354753 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.3b.1 10352222 10354753 1

1 Sequence

Length
1947

1 Sequence Ontology Term

Identifier Name Description
transcript