WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07C4.1 Sequence Name  T07C4.1
Length (nt)  1494   Chromosome Location  III: 10355968-10356019
Chromosome . Primary Identifier  III Chromosome Location . Start  10355968
Chromosome Location . End  10356019
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00638 UMPS-1 54.8 497 Caenorhabditis elegans
 

Other

56 RNAi

WormBase ID
WBRNAi00001717
WBRNAi00052721
WBRNAi00066682
WBRNAi00006100
WBRNAi00035290
WBRNAi00061689
WBRNAi00009137
WBRNAi00026225
WBRNAi00082296
WBRNAi00082299
WBRNAi00082302
WBRNAi00082304
WBRNAi00082305
WBRNAi00082312
WBRNAi00082314
WBRNAi00082316
WBRNAi00082315
WBRNAi00082318
WBRNAi00082317
WBRNAi00082320
WBRNAi00082319
WBRNAi00082322
WBRNAi00082321
WBRNAi00082324
WBRNAi00082323
WBRNAi00082326
WBRNAi00082325
WBRNAi00082328
WBRNAi00082327
WBRNAi00082330

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07C4.1 10355968 10356019 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011559 umps-1 T07C4.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07C4.1 10355968 10356019 -1
CDS:T07C4.1 10356072 10356895 -1
CDS:T07C4.1 10356951 10357400 -1
CDS:T07C4.1 10357476 10357643 -1

1 Sequence

Length
1494

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07C4.1.1 T07C4.1.1 1630   III: 10355837-10357648