WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38H2.1a.1 Sequence Name  C38H2.1a.1
Length (nt)  3032   Chromosome Location  III: 10364956-10373234
Chromosome . Primary Identifier  III Chromosome Location . Start  10364956
Chromosome Location . End  10373234 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38H2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008018 tbc-8 C38H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38H2.1a C38H2.1a 2742   III: 10365066-10365220

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38H2.1a.1 10364956 10373234 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103075   265   III: 10364956-10365220 Caenorhabditis elegans
Exon103076   118   III: 10365779-10365896 Caenorhabditis elegans
Exon103077   326   III: 10366449-10366774 Caenorhabditis elegans
Exon103078   74   III: 10366940-10367013 Caenorhabditis elegans
Exon103079   128   III: 10368755-10368882 Caenorhabditis elegans
Exon103081   157   III: 10369382-10369538 Caenorhabditis elegans
Exon103083   354   III: 10369766-10370119 Caenorhabditis elegans
Exon103085   166   III: 10370325-10370490 Caenorhabditis elegans
Exon103087   54   III: 10370738-10370791 Caenorhabditis elegans
Exon103089   202   III: 10370840-10371041 Caenorhabditis elegans
Exon103091   168   III: 10371204-10371371 Caenorhabditis elegans
Exon103093   129   III: 10371461-10371589 Caenorhabditis elegans
Exon103095   143   III: 10371637-10371779 Caenorhabditis elegans
Exon103097   98   III: 10371826-10371923 Caenorhabditis elegans
Exon103099   110   III: 10371969-10372078 Caenorhabditis elegans
Exon103101   97   III: 10372302-10372398 Caenorhabditis elegans
Exon103103   171   III: 10372748-10372918 Caenorhabditis elegans
Exon103106   272   III: 10372963-10373234 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38H2.1a.1 10364956 10373234 1

1 Sequence

Length
3032

1 Sequence Ontology Term

Identifier Name Description
transcript