WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38H2.2.1 Sequence Name  C38H2.2.1
Length (nt)  1757   Chromosome Location  III: 10381773-10385335
Chromosome . Primary Identifier  III Chromosome Location . Start  10381773
Chromosome Location . End  10385335 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38H2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008019 C38H2.2 C38H2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38H2.2 C38H2.2 1170   III: 10381786-10381878

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38H2.2.1 10381773 10385335 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103141   106   III: 10381773-10381878 Caenorhabditis elegans
Exon103142   96   III: 10381996-10382091 Caenorhabditis elegans
Exon103143   212   III: 10382338-10382549 Caenorhabditis elegans
Exon103144   315   III: 10382893-10383207 Caenorhabditis elegans
Exon103145   138   III: 10383257-10383394 Caenorhabditis elegans
Exon103146   113   III: 10384023-10384135 Caenorhabditis elegans
Exon103147   81   III: 10384302-10384382 Caenorhabditis elegans
Exon103148   696   III: 10384640-10385335 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38H2.2.1 10381773 10385335 1

1 Sequence

Length
1757

1 Sequence Ontology Term

Identifier Name Description
transcript