WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03C11.3a.1 Sequence Name  M03C11.3a.1
Length (nt)  3938   Chromosome Location  III: 10405070-10415887
Chromosome . Primary Identifier  III Chromosome Location . Start  10405070
Chromosome Location . End  10415887 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03C11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010840 M03C11.3 M03C11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03C11.3a M03C11.3a 2508   III: 10408267-10408287

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03C11.3a.1 10405070 10415887 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103148   201   III: 10405070-10405270 Caenorhabditis elegans
Exon103154   65   III: 10408223-10408287 Caenorhabditis elegans
Exon103156   228   III: 10408370-10408597 Caenorhabditis elegans
Exon103157   129   III: 10409001-10409129 Caenorhabditis elegans
Exon103159   194   III: 10409616-10409809 Caenorhabditis elegans
Exon103161   843   III: 10410246-10411088 Caenorhabditis elegans
Exon103163   239   III: 10411643-10411881 Caenorhabditis elegans
Exon103165   151   III: 10412648-10412798 Caenorhabditis elegans
Exon103167   241   III: 10413023-10413263 Caenorhabditis elegans
Exon103169   180   III: 10413543-10413722 Caenorhabditis elegans
Exon103172   1467   III: 10414421-10415887 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03C11.3a.1 10405070 10415887 1

1 Sequence

Length
3938

1 Sequence Ontology Term

Identifier Name Description
transcript