WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03C11.5.1 Sequence Name  M03C11.5.1
Length (nt)  2584   Chromosome Location  III: 10416139-10421757
Chromosome . Primary Identifier  III Chromosome Location . Start  10416139
Chromosome Location . End  10421757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03C11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010842 ymel-1 M03C11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03C11.5 M03C11.5 2172   III: 10416151-10416223

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03C11.5.1 10416139 10421757 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103173   85   III: 10416139-10416223 Caenorhabditis elegans
Exon103174   231   III: 10417086-10417316 Caenorhabditis elegans
Exon103175   345   III: 10417963-10418307 Caenorhabditis elegans
Exon103176   107   III: 10418801-10418907 Caenorhabditis elegans
Exon103177   260   III: 10419187-10419446 Caenorhabditis elegans
Exon103178   105   III: 10419670-10419774 Caenorhabditis elegans
Exon103179   700   III: 10419828-10420527 Caenorhabditis elegans
Exon103180   156   III: 10420852-10421007 Caenorhabditis elegans
Exon103181   595   III: 10421163-10421757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03C11.5.1 10416139 10421757 1

1 Sequence

Length
2584

1 Sequence Ontology Term

Identifier Name Description
transcript