WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04D03.2a.1 Sequence Name  H04D03.2a.1
Length (nt)  2056   Chromosome Location  III: 10439335-10442405
Chromosome . Primary Identifier  III Chromosome Location . Start  10439335
Chromosome Location . End  10442405 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04D03.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010363 H04D03.2 H04D03.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04D03.2a H04D03.2a 1899   III: 10439492-10439590

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04D03.2a.1 10439335 10442405 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103210   256   III: 10439335-10439590 Caenorhabditis elegans
Exon103213   333   III: 10439645-10439977 Caenorhabditis elegans
Exon103214   237   III: 10440163-10440399 Caenorhabditis elegans
Exon103215   679   III: 10440725-10441403 Caenorhabditis elegans
Exon103216   255   III: 10441698-10441952 Caenorhabditis elegans
Exon103217   114   III: 10442003-10442116 Caenorhabditis elegans
Exon103218   105   III: 10442171-10442275 Caenorhabditis elegans
Exon103219   77   III: 10442329-10442405 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04D03.2a.1 10439335 10442405 -1

1 Sequence

Length
2056

1 Sequence Ontology Term

Identifier Name Description
transcript