WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04D03.3.1 Sequence Name  H04D03.3.1
Length (nt)  1290   Chromosome Location  III: 10443090-10444946
Chromosome . Primary Identifier  III Chromosome Location . Start  10443090
Chromosome Location . End  10444946 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04D03.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010364 ecps-2 H04D03.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04D03.3 H04D03.3 1230   III: 10443149-10443233

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04D03.3.1 10443090 10444946 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103220   144   III: 10443090-10443233 Caenorhabditis elegans
Exon103221   351   III: 10443473-10443823 Caenorhabditis elegans
Exon103222   301   III: 10443955-10444255 Caenorhabditis elegans
Exon103223   494   III: 10444453-10444946 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04D03.3.1 10443090 10444946 1

1 Sequence

Length
1290

1 Sequence Ontology Term

Identifier Name Description
transcript