WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2045.2 Sequence Name  D2045.2
Length (nt)  5433   Chromosome Location  III: 10452897-10453389
Chromosome . Primary Identifier  III Chromosome Location . Start  10452897
Chromosome Location . End  10453389
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2045.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44924 ECPS-1 200.8 1810 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00002360
WBRNAi00043481
WBRNAi00049281
WBRNAi00012581
WBRNAi00016180
WBRNAi00006003
WBRNAi00007000
WBRNAi00080551

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2045.2 10452897 10453389 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008422 ecps-1 D2045.2 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2045.2 10452897 10453389 -1
CDS:D2045.2 10453587 10453887 -1
CDS:D2045.2 10454019 10454369 -1
CDS:D2045.2 10454544 10455733 -1
CDS:D2045.2 10455995 10456338 -1
CDS:D2045.2 10456502 10457325 -1
CDS:D2045.2 10457463 10457655 -1
CDS:D2045.2 10457706 10458128 -1
CDS:D2045.2 10458524 10458799 -1
CDS:D2045.2 10458846 10458938 -1
CDS:D2045.2 10458991 10459132 -1
CDS:D2045.2 10459406 10459633 -1
CDS:D2045.2 10459770 10459913 -1
CDS:D2045.2 10459960 10460084 -1
CDS:D2045.2 10460139 10460249 -1
CDS:D2045.2 10460308 10460429 -1
CDS:D2045.2 10460478 10460550 -1

1 Sequence

Length
5433

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2045.2.1 D2045.2.1 5578   III: 10452753-10460551