WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2045.1c.1 Sequence Name  D2045.1c.1
Length (nt)  3529   Chromosome Location  III: 10461713-10468044
Chromosome . Primary Identifier  III Chromosome Location . Start  10461713
Chromosome Location . End  10468044 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2045.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000231 atx-2 D2045.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2045.1c D2045.1c 2802   III: 10461713-10461724

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2045.1c.1 10461713 10468044 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103254   12   III: 10461713-10461724 Caenorhabditis elegans
Exon103256   292   III: 10461773-10462064 Caenorhabditis elegans
Exon103259   262   III: 10462188-10462449 Caenorhabditis elegans
Exon103262   174   III: 10462769-10462942 Caenorhabditis elegans
Exon103265   236   III: 10462997-10463232 Caenorhabditis elegans
Exon103268   360   III: 10464456-10464815 Caenorhabditis elegans
Exon103273   222   III: 10464869-10465090 Caenorhabditis elegans
Exon103277   410   III: 10465326-10465735 Caenorhabditis elegans
Exon103281   315   III: 10465873-10466187 Caenorhabditis elegans
Exon103285   292   III: 10466295-10466586 Caenorhabditis elegans
Exon103289   213   III: 10467042-10467254 Caenorhabditis elegans
Exon103291   741   III: 10467304-10468044 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2045.1c.1 10461713 10468044 1

1 Sequence

Length
3529

1 Sequence Ontology Term

Identifier Name Description
transcript