WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1c.1 Sequence Name  T21C12.1c.1
Length (nt)  2606   Chromosome Location  III: 10520762-10532705
Chromosome . Primary Identifier  III Chromosome Location . Start  10520762
Chromosome Location . End  10532705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1c T21C12.1c 1464   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1c.1 10520762 10532705 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103405   280   III: 10520762-10521041 Caenorhabditis elegans
Exon103414   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103422   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103430   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103438   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103469   150   III: 10527970-10528119 Caenorhabditis elegans
Exon103475   256   III: 10528370-10528625 Caenorhabditis elegans
Exon103481   160   III: 10528677-10528836 Caenorhabditis elegans
Exon103488   36   III: 10529338-10529373 Caenorhabditis elegans
Exon103493   123   III: 10529432-10529554 Caenorhabditis elegans
Exon103499   91   III: 10529735-10529825 Caenorhabditis elegans
Exon103505   85   III: 10529873-10529957 Caenorhabditis elegans
Exon103514   153   III: 10530586-10530738 Caenorhabditis elegans
Exon103520   104   III: 10531229-10531332 Caenorhabditis elegans
Exon103526   286   III: 10531379-10531664 Caenorhabditis elegans
Exon103533   131   III: 10532209-10532339 Caenorhabditis elegans
Exon103545   263   III: 10532443-10532705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1c.1 10520762 10532705 1

1 Sequence

Length
2606

1 Sequence Ontology Term

Identifier Name Description
transcript