WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1c.2 Sequence Name  T21C12.1c.2
Length (nt)  1742   Chromosome Location  III: 10520843-10530739
Chromosome . Primary Identifier  III Chromosome Location . Start  10520843
Chromosome Location . End  10530739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1c T21C12.1c 1464   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1c.2 10520843 10530739 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103408   199   III: 10520843-10521041 Caenorhabditis elegans
Exon103415   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103423   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103431   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103439   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103470   150   III: 10527970-10528119 Caenorhabditis elegans
Exon103476   256   III: 10528370-10528625 Caenorhabditis elegans
Exon103482   160   III: 10528677-10528836 Caenorhabditis elegans
Exon103489   36   III: 10529338-10529373 Caenorhabditis elegans
Exon103494   123   III: 10529432-10529554 Caenorhabditis elegans
Exon103500   91   III: 10529735-10529825 Caenorhabditis elegans
Exon103506   85   III: 10529873-10529957 Caenorhabditis elegans
Exon103519   154   III: 10530586-10530739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1c.2 10520843 10530739 1

1 Sequence

Length
1742

1 Sequence Ontology Term

Identifier Name Description
transcript