WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1k.1 Sequence Name  T21C12.1k.1
Length (nt)  1467   Chromosome Location  III: 10520968-10529961
Chromosome . Primary Identifier  III Chromosome Location . Start  10520968
Chromosome Location . End  10529961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1k T21C12.1k 1467   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1k.1 10520968 10529961 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103415   74   III: 10520968-10521041 Caenorhabditis elegans
Exon103423   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103431   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103439   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103447   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103476   150   III: 10527970-10528119 Caenorhabditis elegans
Exon103482   256   III: 10528370-10528625 Caenorhabditis elegans
Exon103488   160   III: 10528677-10528836 Caenorhabditis elegans
Exon103494   36   III: 10529338-10529373 Caenorhabditis elegans
Exon103500   123   III: 10529432-10529554 Caenorhabditis elegans
Exon103506   91   III: 10529735-10529825 Caenorhabditis elegans
Exon103513   89   III: 10529873-10529961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1k.1 10520968 10529961 1

1 Sequence

Length
1467

1 Sequence Ontology Term

Identifier Name Description
transcript