WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1b.1 Sequence Name  T21C12.1b.1
Length (nt)  1657   Chromosome Location  III: 10520845-10527870
Chromosome . Primary Identifier  III Chromosome Location . Start  10520845
Chromosome Location . End  10527870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1b T21C12.1b 1464   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1b.1 10520845 10527870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103443   197   III: 10520845-10521041 Caenorhabditis elegans
Exon103446   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103454   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103462   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103470   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103481   132   III: 10524874-10525005 Caenorhabditis elegans
Exon103484   200   III: 10525273-10525472 Caenorhabditis elegans
Exon103486   49   III: 10525893-10525941 Caenorhabditis elegans
Exon103489   100   III: 10526921-10527020 Caenorhabditis elegans
Exon103491   160   III: 10527107-10527266 Caenorhabditis elegans
Exon103493   79   III: 10527388-10527466 Caenorhabditis elegans
Exon103496   92   III: 10527567-10527658 Caenorhabditis elegans
Exon103501   160   III: 10527711-10527870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1b.1 10520845 10527870 1

1 Sequence

Length
1657

1 Sequence Ontology Term

Identifier Name Description
transcript