WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.2.1 Sequence Name  T21C12.2.1
Length (nt)  1381   Chromosome Location  III: 10535526-10537680
Chromosome . Primary Identifier  III Chromosome Location . Start  10535526
Chromosome Location . End  10537680 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001993 hpd-1 T21C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.2 T21C12.2 1182   III: 10535548-10535958

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.2.1 10535526 10537680 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103548   433   III: 10535526-10535958 Caenorhabditis elegans
Exon103549   297   III: 10536121-10536417 Caenorhabditis elegans
Exon103550   651   III: 10537030-10537680 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.2.1 10535526 10537680 1

1 Sequence

Length
1381

1 Sequence Ontology Term

Identifier Name Description
transcript