WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.8a.1 Sequence Name  T21C12.8a.1
Length (nt)  1128   Chromosome Location  III: 10551102-10553029
Chromosome . Primary Identifier  III Chromosome Location . Start  10551102
Chromosome Location . End  10553029 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043998 T21C12.8 T21C12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.8a T21C12.8a 978   III: 10551178-10551305

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.8a.1 10551102 10553029 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103555   204   III: 10551102-10551305 Caenorhabditis elegans
Exon103557   219   III: 10551463-10551681 Caenorhabditis elegans
Exon103560   164   III: 10551836-10551999 Caenorhabditis elegans
Exon103561   79   III: 10552204-10552282 Caenorhabditis elegans
Exon103562   54   III: 10552361-10552414 Caenorhabditis elegans
Exon103563   55   III: 10552460-10552514 Caenorhabditis elegans
Exon103564   110   III: 10552567-10552676 Caenorhabditis elegans
Exon103565   115   III: 10552722-10552836 Caenorhabditis elegans
Exon103566   128   III: 10552902-10553029 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.8a.1 10551102 10553029 -1

1 Sequence

Length
1128

1 Sequence Ontology Term

Identifier Name Description
transcript