WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y45F3A.2 Sequence Name  Y45F3A.2
Length (nt)  651   Chromosome Location  III: 10563041-10563127
Chromosome . Primary Identifier  III Chromosome Location . Start  10563041
Chromosome Location . End  10563127
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F3A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19165 RAB-30 24.3 216 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00107753
WBRNAi00083362
WBRNAi00006318
WBRNAi00037103
WBRNAi00091940
WBRNAi00056611

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y45F3A.2 10563041 10563127 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004282 rab-30 Y45F3A.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y45F3A.2 10563041 10563127 1
CDS:Y45F3A.2 10563278 10563361 1
CDS:Y45F3A.2 10563406 10563467 1
CDS:Y45F3A.2 10564051 10564172 1
CDS:Y45F3A.2 10564227 10564291 1
CDS:Y45F3A.2 10564514 10564629 1
CDS:Y45F3A.2 10565167 10565281 1

1 Sequence

Length
651

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y45F3A.2.2 Y45F3A.2.2 1189   III: 10560596-10565603
Transcript:Y45F3A.2.1 Y45F3A.2.1 987   III: 10563026-10565602