WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y45F3A.3a Sequence Name  Y45F3A.3a
Length (nt)  1854   Chromosome Location  III: 10566286-10566311
Chromosome . Primary Identifier  III Chromosome Location . Start  10566286
Chromosome Location . End  10566311
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F3A.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19166 ACDH-11, isoform a 68.3 617 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00056612
WBRNAi00056613
WBRNAi00020612
WBRNAi00006158
WBRNAi00006952
WBRNAi00037104
WBRNAi00103793

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y45F3A.3a 10566286 10566311 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012860 acdh-11 Y45F3A.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y45F3A.3a 10566286 10566311 1
CDS:Y45F3A.3a 10566591 10566704 1
CDS:Y45F3A.3a 10567405 10567789 1
CDS:Y45F3A.3a 10568775 10568945 1
CDS:Y45F3A.3a 10568997 10569340 1
CDS:Y45F3A.3a 10569594 10569651 1
CDS:Y45F3A.3a 10570199 10570604 1
CDS:Y45F3A.3a 10571200 10571549 1

1 Sequence

Length
1854

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y45F3A.3a.1 Y45F3A.3a.1 1936   III: 10566258-10571603