WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A1A.2b Sequence Name  Y39A1A.2b
Length (nt)  411   Chromosome Location  III: 10601915-10602047
Chromosome . Primary Identifier  III Chromosome Location . Start  10601915
Chromosome Location . End  10602047
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52983 Y39A1A.2, isoform b 15.3 136 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056105
WBRNAi00006481

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.2b 10601915 10602047 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012642 Y39A1A.2 Y39A1A.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.2b 10601915 10602047 -1
CDS:Y39A1A.2b 10603070 10603185 -1
CDS:Y39A1A.2b 10603309 10603419 -1
CDS:Y39A1A.2b 10603499 10603549 -1

1 Sequence

Length
411

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A1A.2b.1 Y39A1A.2b.1 428   III: 10601899-10603550