WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A1A.6 Sequence Name  Y39A1A.6
Length (nt)  783   Chromosome Location  III: 10615467-10615760
Chromosome . Primary Identifier  III Chromosome Location . Start  10615467
Chromosome Location . End  10615760
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19125 MRPL-22 30.5 260 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00056117
WBRNAi00072869
WBRNAi00072871
WBRNAi00006378
WBRNAi00036887
WBRNAi00072870
WBRNAi00061652
WBRNAi00109883

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.6 10615467 10615760 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012645 mrpl-22 Y39A1A.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.6 10615467 10615760 1
CDS:Y39A1A.6 10616342 10616518 1
CDS:Y39A1A.6 10616735 10616861 1
CDS:Y39A1A.6 10617607 10617791 1

1 Sequence

Length
783

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A1A.6.1 Y39A1A.6.1 852   III: 10615466-10617859