WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.9.1 Sequence Name  Y39A1A.9.1
Length (nt)  1953   Chromosome Location  III: 10630070-10633501
Chromosome . Primary Identifier  III Chromosome Location . Start  10630070
Chromosome Location . End  10633501 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012648 meic-1 Y39A1A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.9 Y39A1A.9 1398   III: 10630623-10630810

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.9.1 10630070 10633501 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103740   741   III: 10630070-10630810 Caenorhabditis elegans
Exon103741   835   III: 10630860-10631694 Caenorhabditis elegans
Exon103742   258   III: 10631771-10632028 Caenorhabditis elegans
Exon103744   119   III: 10633383-10633501 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.9.1 10630070 10633501 -1

1 Sequence

Length
1953

1 Sequence Ontology Term

Identifier Name Description
transcript