WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.11b.1 Sequence Name  Y39A1A.11b.1
Length (nt)  444   Chromosome Location  III: 10640886-10642212
Chromosome . Primary Identifier  III Chromosome Location . Start  10640886
Chromosome Location . End  10642212 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000974 dhs-11 Y39A1A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.11b Y39A1A.11b 444   III: 10640886-10641101

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.11b.1 10640886 10642212 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103749   216   III: 10640886-10641101 Caenorhabditis elegans
Exon103750   228   III: 10641985-10642212 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.11b.1 10640886 10642212 -1

1 Sequence

Length
444

1 Sequence Ontology Term

Identifier Name Description
transcript