WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A1A.12 Sequence Name  Y39A1A.12
Length (nt)  1911   Chromosome Location  III: 10643134-10644066
Chromosome . Primary Identifier  III Chromosome Location . Start  10643134
Chromosome Location . End  10644066
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19131 ORC-1 72.1 636 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00056094
WBRNAi00072866
WBRNAi00072868
WBRNAi00099959
WBRNAi00100491
WBRNAi00061490
WBRNAi00006088
WBRNAi00036879
WBRNAi00100865
WBRNAi00101147
WBRNAi00099353
WBRNAi00099555
WBRNAi00099757
WBRNAi00072867
WBRNAi00100117
WBRNAi00100304
WBRNAi00101052
WBRNAi00101214
WBRNAi00100678

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.12 10643134 10644066 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012650 orc-1 Y39A1A.12 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.12 10643134 10644066 1
CDS:Y39A1A.12 10644127 10644230 1
CDS:Y39A1A.12 10644808 10645417 1
CDS:Y39A1A.12 10645696 10645959 1

1 Sequence

Length
1911

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A1A.12.1 Y39A1A.12.1 2015   III: 10643129-10646058