WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.14.1 Sequence Name  Y39A1A.14.1
Length (nt)  1053   Chromosome Location  III: 10649519-10650908
Chromosome . Primary Identifier  III Chromosome Location . Start  10649519
Chromosome Location . End  10650908 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012652 emg-1 Y39A1A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.14 Y39A1A.14 696   III: 10649519-10649885

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.14.1 10649519 10650908 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103784   367   III: 10649519-10649885 Caenorhabditis elegans
Exon103785   686   III: 10650223-10650908 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.14.1 10649519 10650908 1

1 Sequence

Length
1053

1 Sequence Ontology Term

Identifier Name Description
transcript