WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.15g.1 Sequence Name  Y39A1A.15g.1
Length (nt)  2529   Chromosome Location  III: 10672846-10677522
Chromosome . Primary Identifier  III Chromosome Location . Start  10672846
Chromosome Location . End  10677522 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.15g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000566 cnt-2 Y39A1A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.15g Y39A1A.15g 2001   III: 10673006-10673440

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.15g.1 10672846 10677522 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103831   595   III: 10672846-10673440 Caenorhabditis elegans
Exon103848   125   III: 10673895-10674019 Caenorhabditis elegans
Exon103857   1123   III: 10674509-10675631 Caenorhabditis elegans
Exon103866   162   III: 10676454-10676615 Caenorhabditis elegans
Exon103874   524   III: 10676999-10677522 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.15g.1 10672846 10677522 1

1 Sequence

Length
2529

1 Sequence Ontology Term

Identifier Name Description
transcript