WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A1A.21a Sequence Name  Y39A1A.21a
Length (nt)  573   Chromosome Location  III: 10700792-10700845
Chromosome . Primary Identifier  III Chromosome Location . Start  10700792
Chromosome Location . End  10700845
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.21a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50211 Y39A1A.21, isoform a 20.5 190 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00056107
WBRNAi00020344
WBRNAi00036885
WBRNAi00092993

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.21a 10700792 10700845 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012658 Y39A1A.21 Y39A1A.21 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A1A.21a 10700792 10700845 -1
CDS:Y39A1A.21a 10701544 10701715 -1
CDS:Y39A1A.21a 10702413 10702525 -1
CDS:Y39A1A.21a 10706570 10706803 -1

1 Sequence

Length
573

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A1A.21a.2 Y39A1A.21a.2 703   III: 10700665-10706806
Transcript:Y39A1A.21a.1 Y39A1A.21a.1 761   III: 10700672-10707022