WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.22.1 Sequence Name  Y39A1A.22.1
Length (nt)  3402   Chromosome Location  III: 10702613-10707028
Chromosome . Primary Identifier  III Chromosome Location . Start  10702613
Chromosome Location . End  10707028 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.22.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012659 Y39A1A.22 Y39A1A.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.22 Y39A1A.22 2133   III: 10703809-10705305

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.22.1 10702613 10707028 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103936   2693   III: 10702613-10705305 Caenorhabditis elegans
Exon103937   636   III: 10705905-10706540 Caenorhabditis elegans
Exon103942   73   III: 10706956-10707028 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.22.1 10702613 10707028 -1

1 Sequence

Length
3402

1 Sequence Ontology Term

Identifier Name Description
transcript