WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W09D10.1 Sequence Name  W09D10.1
Length (nt)  1488   Chromosome Location  III: 10737251-10737445
Chromosome . Primary Identifier  III Chromosome Location . Start  10737251
Chromosome Location . End  10737445
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D10.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16562 SMAP-1 51.9 495 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00009273
WBRNAi00055034
WBRNAi00060518
WBRNAi00060519
WBRNAi00026528
WBRNAi00002595
WBRNAi00060516
WBRNAi00060517
WBRNAi00098441

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W09D10.1 10737251 10737445 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012359 smap-1 W09D10.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:W09D10.1 10737251 10737445 -1
CDS:W09D10.1 10737969 10738441 -1
CDS:W09D10.1 10738653 10739350 -1
CDS:W09D10.1 10739657 10739778 -1

1 Sequence

Length
1488

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W09D10.1.2 W09D10.1.2 1854   III: 10736893-10739786
Transcript:W09D10.1.1 W09D10.1.1 1860   III: 10736893-10739792