WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09D10.2.1 Sequence Name  W09D10.2.1
Length (nt)  5144   Chromosome Location  III: 10722148-10730705
Chromosome . Primary Identifier  III Chromosome Location . Start  10722148
Chromosome Location . End  10730705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012360 tat-3 W09D10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09D10.2 W09D10.2 4236   III: 10722568-10722588

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09D10.2.1 10722148 10730705 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104003   441   III: 10722148-10722588 Caenorhabditis elegans
Exon104004   89   III: 10722978-10723066 Caenorhabditis elegans
Exon104006   136   III: 10723138-10723273 Caenorhabditis elegans
Exon104008   267   III: 10723803-10724069 Caenorhabditis elegans
Exon104010   453   III: 10724246-10724698 Caenorhabditis elegans
Exon104012   843   III: 10725323-10726165 Caenorhabditis elegans
Exon104014   270   III: 10726676-10726945 Caenorhabditis elegans
Exon104016   657   III: 10727216-10727872 Caenorhabditis elegans
Exon104018   198   III: 10728026-10728223 Caenorhabditis elegans
Exon104020   471   III: 10728278-10728748 Caenorhabditis elegans
Exon104022   709   III: 10728841-10729549 Caenorhabditis elegans
Exon104024   113   III: 10729881-10729993 Caenorhabditis elegans
Exon104026   122   III: 10730166-10730287 Caenorhabditis elegans
Exon104028   375   III: 10730331-10730705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09D10.2.1 10722148 10730705 -1

1 Sequence

Length
5144

1 Sequence Ontology Term

Identifier Name Description
transcript