WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01G5.4.1 Sequence Name  K01G5.4.1
Length (nt)  959   Chromosome Location  III: 10746581-10747728
Chromosome . Primary Identifier  III Chromosome Location . Start  10746581
Chromosome Location . End  10747728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01G5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004302 ran-1 K01G5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01G5.4 K01G5.4 648   III: 10746890-10746982

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01G5.4.1 10746581 10747728 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104024   402   III: 10746581-10746982 Caenorhabditis elegans
Exon104025   189   III: 10747030-10747218 Caenorhabditis elegans
Exon104026   122   III: 10747266-10747387 Caenorhabditis elegans
Exon104027   126   III: 10747435-10747560 Caenorhabditis elegans
Exon104028   120   III: 10747609-10747728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01G5.4.1 10746581 10747728 -1

1 Sequence

Length
959

1 Sequence Ontology Term

Identifier Name Description
transcript