WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01G5.2c.1 Sequence Name  K01G5.2c.1
Length (nt)  993   Chromosome Location  III: 10752254-10755521
Chromosome . Primary Identifier  III Chromosome Location . Start  10752254
Chromosome Location . End  10755521 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01G5.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001996 hpl-2 K01G5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01G5.2c K01G5.2c 912   III: 10752324-10752554

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01G5.2c.1 10752254 10755521 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104040   301   III: 10752254-10752554 Caenorhabditis elegans
Exon104042   72   III: 10752960-10753031 Caenorhabditis elegans
Exon104044   154   III: 10753403-10753556 Caenorhabditis elegans
Exon104049   239   III: 10754515-10754753 Caenorhabditis elegans
Exon104052   174   III: 10755021-10755194 Caenorhabditis elegans
Exon104054   53   III: 10755469-10755521 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01G5.2c.1 10752254 10755521 -1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
transcript