WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K01G5.9 Sequence Name  K01G5.9
Length (nt)  996   Chromosome Location  III: 10759767-10759800
Chromosome . Primary Identifier  III Chromosome Location . Start  10759767
Chromosome Location . End  10759800
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01G5.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33132 TASP-1 37.0 331 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00049640
WBRNAi00016413
WBRNAi00006469
WBRNAi00033834
WBRNAi00062297
WBRNAi00089103

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K01G5.9 10759767 10759800 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010480 tasp-1 K01G5.9 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:K01G5.9 10759767 10759800 1
CDS:K01G5.9 10759852 10759934 1
CDS:K01G5.9 10759988 10760091 1
CDS:K01G5.9 10760143 10760291 1
CDS:K01G5.9 10760344 10760474 1
CDS:K01G5.9 10761463 10761686 1
CDS:K01G5.9 10762354 10762419 1
CDS:K01G5.9 10762602 10762806 1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K01G5.9.3 K01G5.9.3 1454   III: 10759307-10763021
Transcript:K01G5.9.1 K01G5.9.1 1464   III: 10759385-10763006
Transcript:K01G5.9.2 K01G5.9.2 1294   III: 10759669-10763006