WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R17.3c.1 Sequence Name  R17.3c.1
Length (nt)  765   Chromosome Location  III: 10837445-10839176
Chromosome . Primary Identifier  III Chromosome Location . Start  10837445
Chromosome Location . End  10839176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R17.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011269 sbsp-1 R17.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R17.3c R17.3c 765   III: 10837445-10837607

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R17.3c.1 10837445 10839176 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104232   163   III: 10837445-10837607 Caenorhabditis elegans
Exon104235   195   III: 10837817-10838011 Caenorhabditis elegans
Exon104238   121   III: 10838058-10838178 Caenorhabditis elegans
Exon104239   286   III: 10838891-10839176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R17.3c.1 10837445 10839176 1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
transcript