WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A1C.1 Sequence Name  Y39A1C.1
Length (nt)  354   Chromosome Location  III: 10856827-10856941
Chromosome . Primary Identifier  III Chromosome Location . Start  10856827
Chromosome Location . End  10856941
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1C.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19146 Y39A1C.1 12.6 117 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00056127
WBRNAi00020351
WBRNAi00006850
WBRNAi00109815
WBRNAi00036893
WBRNAi00109674
WBRNAi00109768
WBRNAi00109721

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A1C.1 10856827 10856941 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012662 Y39A1C.1 Y39A1C.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A1C.1 10856827 10856941 1
CDS:Y39A1C.1 10857295 10857417 1
CDS:Y39A1C.1 10857987 10858102 1

1 Sequence

Length
354

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A1C.1.2 Y39A1C.1.2 1805   III: 10855448-10858174
Transcript:Y39A1C.1.1 Y39A1C.1.1 489   III: 10856776-10858186