WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44B9.4.2 Sequence Name  C44B9.4.2
Length (nt)  3781   Chromosome Location  III: 10881766-10893696
Chromosome . Primary Identifier  III Chromosome Location . Start  10881766
Chromosome Location . End  10893696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B9.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008081 athp-1 C44B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44B9.4 C44B9.4 3453   III: 10882370-10882435

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44B9.4.2 10881766 10893696 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104295   198   III: 10881766-10881963 Caenorhabditis elegans
Exon104297   75   III: 10882361-10882435 Caenorhabditis elegans
Exon104299   132   III: 10882487-10882618 Caenorhabditis elegans
Exon104301   372   III: 10883185-10883556 Caenorhabditis elegans
Exon104303   107   III: 10884091-10884197 Caenorhabditis elegans
Exon104305   281   III: 10885208-10885488 Caenorhabditis elegans
Exon104307   318   III: 10886565-10886882 Caenorhabditis elegans
Exon104309   132   III: 10887846-10887977 Caenorhabditis elegans
Exon104311   651   III: 10888663-10889313 Caenorhabditis elegans
Exon104313   209   III: 10890122-10890330 Caenorhabditis elegans
Exon104315   578   III: 10891033-10891610 Caenorhabditis elegans
Exon104317   434   III: 10892491-10892924 Caenorhabditis elegans
Exon104319   294   III: 10893403-10893696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44B9.4.2 10881766 10893696 1

1 Sequence

Length
3781

1 Sequence Ontology Term

Identifier Name Description
transcript