WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y52D3.1a Sequence Name  Y52D3.1a
Length (nt)  1167   Chromosome Location  III: 10947459-10947633
Chromosome . Primary Identifier  III Chromosome Location . Start  10947459
Chromosome Location . End  10947633
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52D3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19223 STRD-1, isoform a 44.3 388 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00066053
WBRNAi00057229
WBRNAi00020908
WBRNAi00026803
WBRNAi00026804
WBRNAi00006105
WBRNAi00037392
WBRNAi00108268
WBRNAi00027528
WBRNAi00098408
WBRNAi00098412
WBRNAi00098426

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y52D3.1a 10947459 10947633 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013132 strd-1 Y52D3.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y52D3.1a 10947459 10947633 1
CDS:Y52D3.1a 10948089 10948201 1
CDS:Y52D3.1a 10949137 10949369 1
CDS:Y52D3.1a 10949795 10950150 1
CDS:Y52D3.1a 10950620 10950710 1
CDS:Y52D3.1a 10950786 10950984 1

1 Sequence

Length
1167

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y52D3.1a.1 Y52D3.1a.1 1242   III: 10947455-10951055