WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y52D3.1b Sequence Name  Y52D3.1b
Length (nt)  1154   Chromosome Location  III: 10947459-10950984
Chromosome . Primary Identifier  III Chromosome Location . Start  10947459
Chromosome Location . End  10950984 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52D3.1b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013132 strd-1 Y52D3.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y52D3.1b 10947459 10950984 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104393   162   III: 10947459-10947620 Caenorhabditis elegans
Exon104395   113   III: 10948089-10948201 Caenorhabditis elegans
Exon104397   233   III: 10949137-10949369 Caenorhabditis elegans
Exon104399   356   III: 10949795-10950150 Caenorhabditis elegans
Exon104401   91   III: 10950620-10950710 Caenorhabditis elegans
Exon104402   199   III: 10950786-10950984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y52D3.1b 10947459 10950984 1

1 Sequence

Length
1154

1 Sequence Ontology Term

Identifier Name Description
transcript