WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6A.1.1 Sequence Name  Y48A6A.1.1
Length (nt)  993   Chromosome Location  III: 10951119-10953508
Chromosome . Primary Identifier  III Chromosome Location . Start  10951119
Chromosome Location . End  10953508 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006982 zig-5 Y48A6A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6A.1 Y48A6A.1 783   III: 10951326-10951454

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6A.1.1 10951119 10953508 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104404   336   III: 10951119-10951454 Caenorhabditis elegans
Exon104405   215   III: 10951753-10951967 Caenorhabditis elegans
Exon104406   111   III: 10952274-10952384 Caenorhabditis elegans
Exon104407   247   III: 10953081-10953327 Caenorhabditis elegans
Exon104408   84   III: 10953425-10953508 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6A.1.1 10951119 10953508 -1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
transcript