WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05B2.2.1 Sequence Name  W05B2.2.1
Length (nt)  4195   Chromosome Location  III: 10960049-10967110
Chromosome . Primary Identifier  III Chromosome Location . Start  10960049
Chromosome Location . End  10967110 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05B2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012271 W05B2.2 W05B2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05B2.2 W05B2.2 3837   III: 10960293-10960342

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05B2.2.1 10960049 10967110 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104442   294   III: 10960049-10960342 Caenorhabditis elegans
Exon104443   117   III: 10960704-10960820 Caenorhabditis elegans
Exon104444   93   III: 10960873-10960965 Caenorhabditis elegans
Exon104445   750   III: 10961055-10961804 Caenorhabditis elegans
Exon104447   278   III: 10962041-10962318 Caenorhabditis elegans
Exon104448   320   III: 10962607-10962926 Caenorhabditis elegans
Exon104449   224   III: 10963154-10963377 Caenorhabditis elegans
Exon104450   211   III: 10963426-10963636 Caenorhabditis elegans
Exon104451   281   III: 10963774-10964054 Caenorhabditis elegans
Exon104452   765   III: 10964427-10965191 Caenorhabditis elegans
Exon104453   360   III: 10965630-10965989 Caenorhabditis elegans
Exon104454   147   III: 10966227-10966373 Caenorhabditis elegans
Exon104455   120   III: 10966455-10966574 Caenorhabditis elegans
Exon104456   235   III: 10966876-10967110 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05B2.2.1 10960049 10967110 -1

1 Sequence

Length
4195

1 Sequence Ontology Term

Identifier Name Description
transcript