WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6B.7.1 Sequence Name  Y48A6B.7.1
Length (nt)  581   Chromosome Location  III: 11025239-11026566
Chromosome . Primary Identifier  III Chromosome Location . Start  11025239
Chromosome Location . End  11026566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012968 Y48A6B.7 Y48A6B.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6B.7 Y48A6B.7 507   III: 11025288-11025440

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6B.7.1 11025239 11026566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104534   202   III: 11025239-11025440 Caenorhabditis elegans
Exon104535   119   III: 11025880-11025998 Caenorhabditis elegans
Exon104536   260   III: 11026307-11026566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6B.7.1 11025239 11026566 -1

1 Sequence

Length
581

1 Sequence Ontology Term

Identifier Name Description
transcript