WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09D6.1a.1 Sequence Name  W09D6.1a.1
Length (nt)  2769   Chromosome Location  III: 11068853-11072993
Chromosome . Primary Identifier  III Chromosome Location . Start  11068853
Chromosome Location . End  11072993 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012356 W09D6.1 W09D6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09D6.1a W09D6.1a 2124   III: 11068858-11069051

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.1a.1 11068853 11072993 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104926   199   III: 11068853-11069051 Caenorhabditis elegans
Exon104929   103   III: 11069098-11069200 Caenorhabditis elegans
Exon104933   146   III: 11069282-11069427 Caenorhabditis elegans
Exon104937   190   III: 11069530-11069719 Caenorhabditis elegans
Exon104941   286   III: 11069886-11070171 Caenorhabditis elegans
Exon104945   116   III: 11070271-11070386 Caenorhabditis elegans
Exon104949   617   III: 11070470-11071086 Caenorhabditis elegans
Exon104953   140   III: 11071565-11071704 Caenorhabditis elegans
Exon104957   161   III: 11071748-11071908 Caenorhabditis elegans
Exon104961   126   III: 11071971-11072096 Caenorhabditis elegans
Exon104968   212   III: 11072166-11072377 Caenorhabditis elegans
Exon104971   473   III: 11072521-11072993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.1a.1 11068853 11072993 1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
transcript