WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09D6.1c.1 Sequence Name  W09D6.1c.1
Length (nt)  2704   Chromosome Location  III: 11068853-11072993
Chromosome . Primary Identifier  III Chromosome Location . Start  11068853
Chromosome Location . End  11072993 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012356 W09D6.1 W09D6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09D6.1c W09D6.1c 2670   III: 11068858-11069051

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.1c.1 11068853 11072993 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104958   199   III: 11068853-11069051 Caenorhabditis elegans
Exon104965   103   III: 11069098-11069200 Caenorhabditis elegans
Exon104969   146   III: 11069282-11069427 Caenorhabditis elegans
Exon104973   190   III: 11069530-11069719 Caenorhabditis elegans
Exon104977   286   III: 11069886-11070171 Caenorhabditis elegans
Exon104981   116   III: 11070271-11070386 Caenorhabditis elegans
Exon104985   617   III: 11070470-11071086 Caenorhabditis elegans
Exon104989   140   III: 11071565-11071704 Caenorhabditis elegans
Exon104993   161   III: 11071748-11071908 Caenorhabditis elegans
Exon104996   126   III: 11071971-11072096 Caenorhabditis elegans
Exon104998   147   III: 11072149-11072295 Caenorhabditis elegans
Exon105005   473   III: 11072521-11072993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.1c.1 11068853 11072993 1

1 Sequence

Length
2704

1 Sequence Ontology Term

Identifier Name Description
transcript