WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09D6.1a.2 Sequence Name  W09D6.1a.2
Length (nt)  2683   Chromosome Location  III: 11068856-11072992
Chromosome . Primary Identifier  III Chromosome Location . Start  11068856
Chromosome Location . End  11072992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D6.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012356 W09D6.1 W09D6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09D6.1a W09D6.1a 2124   III: 11068858-11069051

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.1a.2 11068856 11072992 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104960   196   III: 11068856-11069051 Caenorhabditis elegans
Exon104963   103   III: 11069098-11069200 Caenorhabditis elegans
Exon104967   146   III: 11069282-11069427 Caenorhabditis elegans
Exon104971   190   III: 11069530-11069719 Caenorhabditis elegans
Exon104975   286   III: 11069886-11070171 Caenorhabditis elegans
Exon104979   116   III: 11070271-11070386 Caenorhabditis elegans
Exon104983   617   III: 11070470-11071086 Caenorhabditis elegans
Exon104987   140   III: 11071565-11071704 Caenorhabditis elegans
Exon104991   161   III: 11071748-11071908 Caenorhabditis elegans
Exon104995   126   III: 11071971-11072096 Caenorhabditis elegans
Exon104999   130   III: 11072166-11072295 Caenorhabditis elegans
Exon105003   472   III: 11072521-11072992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.1a.2 11068856 11072992 1

1 Sequence

Length
2683

1 Sequence Ontology Term

Identifier Name Description
transcript