WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09D6.3.1 Sequence Name  W09D6.3.1
Length (nt)  1035   Chromosome Location  III: 11077704-11079446
Chromosome . Primary Identifier  III Chromosome Location . Start  11077704
Chromosome Location . End  11079446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006273 str-246 W09D6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09D6.3 W09D6.3 1035   III: 11077704-11077883

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.3.1 11077704 11079446 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104980   180   III: 11077704-11077883 Caenorhabditis elegans
Exon104981   88   III: 11077931-11078018 Caenorhabditis elegans
Exon104982   79   III: 11078071-11078149 Caenorhabditis elegans
Exon104983   135   III: 11078192-11078326 Caenorhabditis elegans
Exon104984   142   III: 11078657-11078798 Caenorhabditis elegans
Exon104985   307   III: 11078982-11079288 Caenorhabditis elegans
Exon104986   104   III: 11079343-11079446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09D6.3.1 11077704 11079446 1

1 Sequence

Length
1035

1 Sequence Ontology Term

Identifier Name Description
transcript